# **R**

### How To Do Pvalue Significance Labeling In R Language?

Boxplots are one of the more common graphs in statistics. This article will describe how to simply …

### [Biomart] Query Error: Caught Biomart::Exception::Usage: Attributes From Multiple Attribute Pages...

## error ``` Query ERROR: caught BioMart::Exception::Usage: Attributes from multiple attribute…

### R Language Ggplot2 Adds Horizontal And Vertical Error Bars To The Pca Scatter Plot Result

## Load the required packages ``` library(ggplot2) library(ggforce) library(tidyverse) ``` …

### R Language For Principal Component Analysis (Pca)

Code and data download link [https://github.com/plemey/SARSCoV2origins](https://github.com/pleme…

### Ggplot2 Plot Scatter Plots And Adds Fitting Curves And Text Labels

Today’s tweet, let’s repeat Figure 5 in the paper ![](https://static-workflow.s3.amazonaws.com/m…

### Use Ggplot2 To Draw Points And Lines To Display The Fst Value Between Groups And The Pi Value Within Groups

Today’s post tries to imitate Figure2d in the paper ![example](https://static-workflow.s3.amazon…

### Use R Language Ggplot2 To Draw Points And Lines To Show The Results Of Mantel's Test~

## preview ![Mantel data visualization](https://static-workflow.s3.amazonaws.com/media/content_m…

### Error: Discrete Value Supplied To Continuous Scale

## Simulation data ``` df <- structure(list(`10` = c(0, 0, 0, 0, 0, 0), `33.95` = c(0, 0, 0, …

### Error In Rstudiogd() : Shadow Graphics Device Error: R Error 4 (R Code Execution Error)

## solution 1 Ctrl + Shift + F10 to restart your R session ## solution 2 Without resta…

### R Data Analysis: How To Use Hierarchical Cluster Analysis To Do "Symptom Clusters", Practice Examples

## introduction I want to do symptom group consultation for many students’ master's thesis. I us…

### Error In Eval(Predvars, Data, Env) : Object ‘**‘ Not Found

![error](https://static-workflow.s3.amazonaws.com/media/content_media/TwoPunch/4e88943e-a320-4e50-a…

### Error While Rich Displaying An Object: Error: Continuous Value Supplied To Discrete Scale

## problem ``` Pre0 <-rms::Predict(fit,Hb,fun=exp,type="predictions",ref.zero=TRUE,conf.int = 0…

### Error: Problem With `Summarise()` Input `..1`.

## error Using the command `df = OG %>% group_by(Gene,Domain) %>% summarise(count())`, the follo…

### Error In Grid.Call(C_Textbounds, As.Graphicsannot(X$Label), X$X, X$Y, : Invalid String In Pan

## description This error occurred when using `forestplot` to draw a forest map ``` Error in…

### R Data Visualization-Bubble Matrix

## Step1. Preparation of drawing data First, adjust the data you want to plot into a format that…

### How To Output Editable Pictures For Powerpoint In R Language

With the support of the ggplot2 package, the R language can make very beautiful statistical graphs.…

### Motif Visualization-From Pfm Matrix To Sequence Logo

How is the Sequence Logo drawn? ## Calculate PFM According to each sequence containing the Mo…

### How To Use R Language To Mark The Significance Of Pvalue?

Box plot is one of the more common graphs in statistics. This article will describe how to simply c…

### Single Cell Transcriptional Regulatory Network Analysis Tool (Tf, Motifs)-Scenic

## Introduction I believe that many topics should have already talked about the use of SCENIC. H…

### Tcga Data Analysis Combat-Cnv And Mutation

## Preface After introducing the query download and data analysis functions of `TCGAbiolinks`, w…

### How To Plot Chord Diagram To Show Gene Density With R Language Circlize Package

## greate example on Cell I was reading a paper recently ![paper](/media/image_P3Dg83S.png) …

### 3 Main R Packages Of Difference Analysis : Deseq2, Edger And Limma

Data needed for difference analysis: **Expression Matrix** and **Grouping Information** **TCGA**…

### The Igraph Package Visualizes Gene Regulatory Networks

## introduction The overall idea can be divided into two major steps: 1. According to the se…

### How To Plot Circular Heatmap In R

## What is a circular heatmap Circular heatmap, as the name suggests, is a form of heat map. Acc…

### Ggplot2 Histogram Data Visualization, How To Use The Stat_*() Function

## Preface We often use `geom_*()` functions when drawing layers, but rarely use `stat_*()` func…

### R Data Visualization-Circlize Genome Drawing Function

## Drawing function The function to create plot regions of genomic data is `circos.genomicTrack(…

### Venn Diagram Upsetr, Clearer Than Traditional Venn Diagram

I just used the Venn diagram recently, but because there are more terms, the visualization effect o…

### How To Plot Upset Diagram In R

Today, I will introduce to you the use of the R package UpSetR and the method of drawing UpSet diag…

### How To Plot Pie Chart In R

## Data structure The data structure is like bellow: ![Data structure](/media/image_6pLZYuL.p…

### How To Plot Enrichment Analysis Scatter Diagram With Ggplot2

## 1\. Scatter plot of enrichment analysis The enrichment analysis scatter plot is a graphical d…

### How To Use Ggpubr Plot Various Kinds Of Box Plots

Today we continue to learn ggpubr package to draw various SCI publication-level box plots. ``` …

### Use Ggpubr To Make Data Visualization More Elegant

ggpubr was created by [Alboukadel Kassambara](http://www.sthda.com/english/rpkgs/ggpubr/index.html)…